Monday, September 9, 2024

AI Corner: Can Scite.AI Write a History of FDA LDT Regulation?

In this blog, I've referred several times to Scite.AI, a subscription service that brings specialized AI and writing skills to PubMed.

One feature is "Scite Assistant" which drafts initial articles on a requested topic.  Here's the request:

Provide a summary of major historical policy articles that review the FDA's authority and history in efforts to regulate Laboratory Developed Tests.

Here's the output back to me, generated by Scite in a few seconds. 

Its initial response didn't include 2023-2024 citations, so I asked again and got that.  I print the original essay below, and then, the 2023-2024 update.  I show one comprehensive bibliography at bottom.  (Scite.AI cited a paper where I'm a coauthor; Huang).  Note that SCITE knows it should spell out terms before using abbreviations.

OUTPUT PART ONE

Provide a summary of major historical policy articles that review the FDA's authority and history in efforts to regulate Laboratory Developed Tests.

The regulation of Laboratory Developed Tests (LDTs) by the U.S. Food and Drug Administration (FDA) has evolved significantly over the years, reflecting the complexities of balancing innovation in diagnostic testing with the need for patient safety and test efficacy. 

Historically, LDTs have been developed and utilized within individual laboratories without the stringent oversight that applies to commercially manufactured in vitro diagnostics (IVDs). This regulatory landscape began to shift notably in the early 2010s when the FDA expressed intentions to assert its authority over LDTs, which had previously been largely unregulated under the Clinical Laboratory Improvement Amendments (CLIA) of 1988 (Vance, 2011; Sharfstein, 2015; Genzen et al., 2017).

In 2014, the FDA released draft guidance proposing a framework for the regulation of LDTs, which sparked considerable debate among stakeholders, including laboratory professionals and public health advocates. The guidance aimed to ensure that LDTs meet the same standards of safety and effectiveness as other medical devices, particularly in light of concerns regarding the accuracy and reliability of these tests (Ratner, 2014; Caliendo et al., 2016). The Infectious Diseases Society of America and other professional organizations voiced apprehensions that stringent regulations could limit access to essential diagnostic tests, particularly in the context of infectious diseases (Caliendo et al., 2016; Sidawy, 2015).

The FDA's approach has been characterized by a recognition of the unique role that LDTs play in clinical practice, particularly in areas where commercial tests are unavailable or inadequate. For instance, the FDA has acknowledged that LDTs are often tailored to meet specific patient needs and can provide critical diagnostic information, especially in rapidly evolving fields such as pharmacogenomics and infectious disease testing (Adashi & Cohen, 2022; Gill et al., 2021; Hillebrenner et al., 2015). However, the lack of uniform oversight has raised concerns about variations in test quality and the potential for misleading results, which can have serious implications for patient care (Genzen, 2019; Huang et al., 2021).

Recent developments, particularly during the COVID-19 pandemic, have further highlighted the need for a regulatory framework that can adapt to emerging public health needs. The FDA's Emergency Use Authorization (EUA) process allowed for the rapid deployment of LDTs for SARS-CoV-2 testing, demonstrating the agency's capacity to exercise oversight in urgent situations (Marble et al., 2021; Schreier et al., 2019). This experience has prompted discussions about the future of LDT regulation, including potential legislative reforms such as the Verifying Accurate Leading-edge In Vitro Clinical Test Development (VALID) Act, which seeks to create a more cohesive regulatory environment for both LDTs and traditional IVDs (Hillebrenner et al., 2015; Peaper et al., 2021; Rychert et al., 2022).

In summary, the historical trajectory of FDA regulation of LDTs reflects a growing recognition of the need for oversight that balances innovation with patient safety. As the landscape continues to evolve, ongoing dialogue among stakeholders will be crucial in shaping a regulatory framework that supports the development of high-quality diagnostic tests while ensuring their reliability and accessibility in clinical practice.


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2023 2024

Do you have access to any articles about the FDA LDT regulations proposed in 2023 and finalized in 2024?

OUTPUT PART TWO

The regulatory landscape surrounding Laboratory Developed Tests (LDTs) has undergone significant changes with the FDA's proposed rule released in October 2023, which aims to end the enforcement discretion that has historically allowed LDTs to operate outside the stringent regulatory framework applied to commercial in vitro diagnostics (IVDs). This proposed rule has been met with a mix of support and criticism from various stakeholders, reflecting the complexities of ensuring patient safety while fostering innovation in laboratory testing (Miller, 2024; Smith, 2024; Offit et al., 2023).

The proposed rule outlines a phased implementation plan that would require LDTs to undergo the same regulatory scrutiny as commercially available tests. This shift is intended to address concerns regarding the quality and reliability of LDTs, which have been developed and validated under the Clinical Laboratory Improvement Amendments (CLIA) but without the comprehensive oversight that the FDA applies to IVDs (Miller, 2024; Bogdanoski, 2024). Critics of the FDA's approach have expressed concerns about the potential impact on patient access to essential diagnostic tests, particularly in specialized areas where LDTs have historically filled gaps left by commercial offerings (Saitman, 2023; Smith, 2024).

In addition to the proposed rule, the ongoing discussions surrounding the Verifying Accurate Leading-edge IVCT Development (VALID) Act further complicate the regulatory environment for LDTs. This legislation aims to create a more cohesive regulatory framework that would encompass both LDTs and traditional IVDs, addressing some of the fragmentation in oversight that has characterized the field (Saitman, 2023; Offit et al., 2023). The VALID Act has been viewed as a potential solution to harmonize regulations and ensure that all diagnostic tests meet high standards of safety and efficacy (Offit et al., 2023).

The implications of these regulatory changes are profound, particularly in light of the COVID-19 pandemic, which highlighted both the critical role of LDTs in public health and the challenges associated with their regulation. The FDA's experience during the pandemic, where it granted Emergency Use Authorizations (EUAs) for numerous LDTs, has informed its current regulatory stance and the proposed rule (Miller, 2024; Bogdanoski, 2024). Stakeholders are now grappling with the balance between ensuring rigorous testing standards and maintaining access to innovative diagnostic solutions that are essential for patient care (Miller, 2024; Saitman, 2023).

In conclusion, the FDA's proposed rule and the discussions surrounding the VALID Act represent a pivotal moment in the regulation of LDTs. As the FDA seeks to assert greater oversight, the ongoing dialogue among clinicians, laboratory professionals, and regulatory bodies will be crucial in shaping a regulatory framework that supports both patient safety and the advancement of diagnostic testing.

Cumulative References (Both Original and 2023 Update)

References:

Adashi, E. and Cohen, I. (2022). Sars-cov-2 laboratory-developed tests. Jama, 327(13), 1229. https://doi.org/10.1001/jama.2022.3382

Bogdanoski, G. (2024). Translating the regulatory landscape of medical devices to create fitforpurpose artificial intelligence (ai) cytometry solutions. Cytometry Part B Clinical Cytometry, 106(4), 294-307. https://doi.org/10.1002/cyto.b.22167

Caliendo, A., Couturier, M., Ginocchio, C., Hanson, K., Miller, M., Walker, K., … & Frank, G. (2016). Maintaining life-saving testing for patients with infectious diseases: infectious diseases society of america, american society for microbiology, and pan american society for clinical virology recommendations on the regulation of laboratory-developed tests. Clinical Infectious Diseases, 63(2), 151-154. https://doi.org/10.1093/cid/ciw260

Genzen, J. (2019). Regulation of laboratory-developed tests. American Journal of Clinical Pathology, 152(2), 122-131. https://doi.org/10.1093/ajcp/aqz096

Genzen, J., Mohlman, J., Lynch, J., Squires, M., & Weiss, R. (2017). Laboratory-developed tests: a legislative and regulatory review. Clinical Chemistry, 63(10), 1575-1584. https://doi.org/10.1373/clinchem.2017.275164

Gill, P., Yu, F., Porter-Gill, P., Boyanton, B., Allen, J., Veerapandiyan, A., … & Schaefer, G. (2021). Implementing pharmacogenomics testing: single center experience at arkansas children’s hospital. Journal of Personalized Medicine, 11(5), 394. https://doi.org/10.3390/jpm11050394

Hillebrenner, E., Litwack, E., Bradley, P., Donigan, K., Lowe, T., Serrano, K., … & GutiĆ©rrez, A. (2015). Fda oversight of laboratorydeveloped tests will facilitate adoption of pharmacogenetic testing into routine clinical care. The Journal of Clinical Pharmacology, 55(7), 728-730. https://doi.org/10.1002/jcph.521

Huang, R., Lasiter, L., Bard, A., Quinn, B., Young, C., Salgado, R., … & Lennerz, J. (2021). National maintenance cost for precision diagnostics under the verifying accurate leading-edge in vitro clinical test development (valid) act of 2020. Jco Oncology Practice, 17(11), e1763-e1773. https://doi.org/10.1200/op.20.00862

Marble, H., Bard, A., Mizrachi, M., & Lennerz, J. (2021). Temporary regulatory deviations and the coronavirus disease 2019 (covid-19) pcr labeling update study indicate what laboratory-developed test regulation by the us food and drug administration (fda) could look like. Journal of Molecular Diagnostics, 23(10), 1207-1217. https://doi.org/10.1016/j.jmoldx.2021.07.011

Miller, M. (2024). Fda’s proposed rule for the regulation of laboratory-developed tests. Journal of Clinical Microbiology, 62(2). https://doi.org/10.1128/jcm.01488-23

Offit, K., Sharkey, C., Green, D., Wu, X., Trottier, M., Hamilton, J., … & Stadler, Z. (2023). Regulation of laboratory-developed tests in preventive oncology: emerging needs and opportunities. Journal of Clinical Oncology, 41(1), 11-21. https://doi.org/10.1200/jco.22.00995

Peaper, D., Rhoads, D., Sullivan, K., Couturier, M., Humphries, R., Martin, I., … & Wojewoda, C. (2021). Considerations from the College of american pathologists for implementation of an assay for sars-cov-2 testing after a change in regulatory status. Journal of Clinical Microbiology, 59(10). https://doi.org/10.1128/jcm.01167-21

Ratner, M. (2014). Fda pushes for control over laboratory-developed tests. Nature Biotechnology, 32(9), 855-855. https://doi.org/10.1038/nbt0914-855a

Rychert, J., Schmidt, R., & Genzen, J. (2022). Laboratory-developed test orders in an academic health system.. https://doi.org/10.1101/2022.12.12.22283358

Saitman, A. (2023). How the VALID act could affect patient access to laboratory developed testing for therapeutic drug monitoring. Journal of Mass Spectrometry and Advances in the Clinical Lab, 28, 56-59. https://doi.org/10.1016/j.jmsacl.2023.02.004

Schreier, J., Feeney, R., & Keeling, P. (2019). Diagnostics reform and harmonization of clinical laboratory testing. Journal of Molecular Diagnostics, 21(5), 737-745. https://doi.org/10.1016/j.jmoldx.2019.04.002

Sharfstein, J. (2015). FDA regulation of laboratory-developed diagnostic tests. Jama, 313(7), 667. https://doi.org/10.1001/jama.2014.18135

Sidawy, M. (2015). US food and drug administration regulatory oversight of laboratorydeveloped tests: commentary on the draft guidance. Cancer Cytopathology, 123(10), 573-575. https://doi.org/10.1002/cncy.21566

Smith, L. (2024). The us FDA's proposed rule on laboratory-developed tests: impacts on clinical laboratory testing. Practical Laboratory Medicine, 40, e00407. https://doi.org/10.1016/j.plabm.2024.e00407

Vance, G. (2011). College of american pathologists proposal for the oversight of laboratory-developed tests. Archives of Pathology & Laboratory Medicine, 135(11), 1432-1435. https://doi.org/10.5858/arpa.2011-0304-sa